Author

Sheng Zu Zhu

Xiamen UniversityORCID 0000-0002-0291-1209Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Approach:statistical model· 2 Research Focus:benchmarking· 1 Research Focus:cell type annotation· 1 Research Focus:clustering· 1 Research Focus:dimensionality reduction· 1 Research Focus:gene regulatory network inference· 1 Organism:human· 1 Organism:mouse· 1

Frequent Co-Authors

Guoli JiiD· 2 shared Xiaohui WuiD· 2 shared Junyi ZhuiD· 1 shared Lishan Ye· 1 shared Pengchao YeiD· 1 shared Qi TangiD· 1 shared Shuting XiaiD· 1 shared Wenbin YeiD· 1 shared

Activity by Year

2021-2023 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 29 mutual co-author links

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2 shared papersBioinformatics

Guoli JiORCID

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2 papers

Recent·Most cited

stAPAminer: Mining Spatial Patterns of Alternative Polyadenylation for Spatially Resolved Transcriptomic Studies

Guoli Ji, Qi Tang, Sheng Zu Zhu, Junyi Zhu, Pengchao Ye, Shuting Xia, Xiaohui Wu

The paper introduces stAPAminer, a toolkit for analyzing spatial patterns of alternative polyadenylation in spatial transcriptomics data, revealing reproducible spatial APA dynamics in mouse olfactory bulb.

Genomics Proteomics & Bioinformatics · Jan 18, 2023Peer-reviewedBioinformatics

Learning association for single-cell transcriptomics by integrating profiling of gene expression and alternative polyadenylation

Guoli Ji, Wujing Xuan, Yibo Zhuang, Lishan Ye, Sheng Zu Zhu, Wenbin Ye, Xi Wang, Xiaohui Wu

The paper introduces scLAPA, a toolkit that improves cell-cell association and clustering in scRNA-seq by integrating gene expression and alternative polyadenylation data.

bioRxiv · Jan 4, 2021 · PreprintBioinformatics