Author

Alexander Artyomenko

Guardant (United States)ORCID 0000-0002-0360-8981Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Approach:statistical model· 2 Research Focus:variant calling· 2 Assay:long-read sequencing· 1 Organism:virus· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Alex ZelikovskyiD· 2 shared Andrew MelnykiD· 1 shared Anupama ShankariD· 1 shared Eleazar EskiniD· 1 shared Ellsworth M. CampbelliD· 1 shared Nicholas C Wu· 1 shared Pavel SkumsiD· 1 shared Ren SuniD· 1 shared

Activity by Year

2017-2021 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 27 mutual co-author links

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2 shared papersBioinformatics

Alex ZelikovskyORCID

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2 papers

Recent·Most cited

BioinformaticsNucleic Acids ResearchPeer-reviewedJun 18, 2021

Accurate assembly of minority viral haplotypes from next-generation sequencing through efficient noise reduction

Sergey Knyazev, Viachaslau Tsyvina, Anupama Shankar…·Alex Zelikovsky

This paper introduces CliqueSNV, a method to accurately identify minority viral haplotypes from NGS data by reducing sequencing noise, achieving detection at frequencies as low as 0.1%.

88 citationstop 3%

whole-genome sequencingstatistical model

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BioinformaticsJournal of Computational BiologyPeer-reviewedJun 1, 2017

Long single-molecule reads can resolve the complexity of the Influenza virus composed of rare, closely related mutant variants

Alexander Artyomenko, Nicholas C Wu, Serghei Mangul…·Alex Zelikovsky

This paper introduces 2SNV, a method to accurately reconstruct rare viral mutant variants from single-molecule sequencing data with high sensitivity and accuracy.

DOI 10.1089/cmb.2016.0146

viruslong-read sequencing

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