Author

R. J. Scott McCairns

Centre National de la Recherche ScientifiqueORCID 0000-0002-0392-7413Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Genomics· 2

Signature Assays, Organisms & Methods

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Approach:statistical model· 2 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Research Focus:gene regulatory network inference· 1 Approach:simulation· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

André Gilles AiD· 1 shared Arnaud UngaroiD· 1 shared Craig Robert PrimmeriD· 1 shared Erica H. LederiD· 1 shared Heidi M. ViitaniemiiD· 1 shared Jean‐François MartiniD· 1 shared Jean‐Philippe MévyiD· 1 shared Juha MeriläiD· 1 shared

Activity by Year

2017-2017 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 20 mutual co-author links

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1 shared paperGenomics

André Gilles AORCID

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2 papers

Recent·Most cited

GenomicsPLoS ONEPeer-reviewedSep 20, 2017

Challenges and advances for transcriptome assembly in non-model species

Arnaud Ungaro, Nicolas Pech, Jean‐François Martin…·André Gilles A

This paper evaluates blastn-based transcriptome-guided assembly for non-model species, showing it outperforms de novo assembly in gene recovery despite divergence and read length challenges.

70 citations

whole-genome sequencingstatistical model

𝕏 PostBluesky

GenomicsG3 Genes Genomes GeneticsPeer-reviewedJan 1, 2017

Regulatory architecture of gene expression variation in the threespine stickleback, Gasterosteus aculeatus.

Victoria L. Pritchard, Heidi M. Viitaniemi, R. J. Scott McCairns…·Erica H. Leder

The paper identifies eQTL and trans regulatory hotspots in threespine stickleback liver tissue, showing complex transcription factor interactions and some links to salinity tolerance.

20 citations

bulk RNA-seqstatistical model

𝕏 PostBluesky