Evi Berchtold

Fuzzifier* provides a differential analysis framework for multi-omics data, identifying reliable and sensitive features by analyzing value distributions and foldchange patterns across groups.

EmpiReS improves detection of differentially expressed and alternatively spliced genes using fold change analysis with empirical error estimation.

The paper introduces a method to improve spectral library coverage in DIA proteomics by using multiple characteristic intensity patterns, achieving near-complete coverage without increasing false discovery rates.