Author

Gitta Szabó

Lawrence Berkeley National LaboratoryORCID 0000-0002-0397-3022Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Ecology· 1 Genomics· 1

Signature Assays, Organisms & Methods

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Assay:metagenomics· 2 Organism:bacteria (other)· 1 Research Focus:clustering· 1 Research Focus:database / resource· 1 Approach:machine learning (classical)· 1 Approach:statistical model· 1 Organism:virus· 1

Frequent Co-Authors

Emiley A. Eloe‐FadroshiD· 2 shared Neha Jacob VargheseiD· 2 shared Nikos C. KyrpidesiD· 2 shared Tanja WoykeiD· 2 shared Alicia ClumiD· 1 shared Axel ViseliD· 1 shared Christopher A. FrancisiD· 1 shared Ewan Whittaker-Walker· 1 shared

Activity by Year

2025-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 37 mutual co-author links

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2 shared papersGenomics

Emiley A. Eloe‐FadroshORCID

Mutual co-authors in cluster

Author profile →

2 papers

Recent·Most cited

A genomic catalog of Earth's bacterial and archaeal symbionts

Juan C. Villada, Yumary M. Vasquez, Gitta Szabó, Ewan Whittaker-Walker, Miguel F. Romero, Sarina Qin, Neha Jacob Varghese, Emiley A. Eloe‐Fadrosh, Nikos C. Kyrpides, Ramūnas Stepanauskas, Christopher A. Francis, Rick Cavicchioli, Trina McMahon, Steven Hallam, Wen‐Tso Liu, , Frederik Schulz

This study uses machine learning to predict symbiotic lifestyles in microbial genomes, identifying 15-23% of uncultivated microbes as potential symbionts and creating a new catalog of symbiont genomes.

Nature Biotechnology · Aug 31, 2026Peer-reviewedGenomics

Tetranucleotide frequencies differentiate genomic boundaries and metabolic strategies across environmental microbiomes

Matthew Kellom, Maureen Berg, I-Min A. Chen, Ken Chu, Alicia Clum, Marcel Huntemann, Natalia Ivanova, Nikos C. Kyrpides, Supratim Mukherjee, T. B. K. Reddy, Simon Roux, R. Seshadri, Gitta Szabó, Neha Jacob Varghese, Tanja Woyke, Emiley A. Eloe‐Fadrosh

The paper develops a tool to analyze tetranucleotide frequencies in metagenomes, revealing environmental-specific microbial community patterns and metabolic trends across 12,000 samples.

mSystems · Jul 8, 2025Peer-reviewedEcology