Author

Shilin Chen

China Academy of Chinese Medical SciencesORCID 0000-0002-0449-236XUnclaimed ORCID profile · follow to get notified of new preprints

Additional preprints under this name without ORCID

Shilin Chen2 papers · University of California, Berkeley

Biology Disciplines

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Genetics· 1 Genomics· 1 Microbiology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 2 Organism:plant (other)· 2 Research Focus:cell type annotation· 1 Research Focus:gene regulatory network inference· 1 Research Focus:genome assembly· 1 Research Focus:host-pathogen & immune response· 1 Assay:metagenomics· 1 Approach:statistical model· 1

Frequent Co-Authors

Jiang XuiD· 2 shared Aizhong Cao· 1 shared Annapurna ChitikineniiD· 1 shared B. Z. GuoiD· 1 shared Baoqing DingiD· 1 shared Baosheng Liao· 1 shared Changfa WangiD· 1 shared Connor HilliD· 1 shared

Activity by Year

2017-2020 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 19 mutual co-author links

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2 shared papersGenomics

Jiang XuORCID

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Author profile →

3 papers

Recent·Most cited

A novel high-accuracy genome assembly method utilizing a high-throughput workflow

Qingdong Zeng, Wenjin Cao, Liping Xing, Guowei Qin, Jianhui Wu, Michael F. Nagle, Qin Xiong, Jinhui Chen, Liming Yang, Prasad Bajaj, Annapurna Chitikineni, Yan Zhou, Yunxin Yu, Jiang Xu, Xiaojun Nie, , Haibin Xu

The paper introduces a high-throughput genome assembly method that improves accuracy and efficiency for complex genomes, achieving 92.7% coverage of a wheat chromosome with 98% correct BAC sequences.

bioRxiv · Nov 26, 2020 · PreprintGenomics

A Tetratricopeptide Repeat Protein Regulates Carotenoid Biosynthesis and Chromoplast Development in Monkeyflowers (Mimulus)

Lauren E. Stanley, Baoqing Ding, Wei Sun, Feng‐Juan Mou, Connor Hill, Shilin Chen, Yao‐Wu Yuan

This study identifies RCP2, a TPR protein regulating carotenoid biosynthesis and chromoplast development in monkeyflowers, showing its independent role from RCP1.

The Plant Cell · Mar 4, 2020Peer-reviewedGenetics

Inoculation Of Biocontrol Bacteria Alleviated Panax ginseng Replanting Problem

Linlin Dong, Jiang Xu, Lianjuan Zhang, Guangfei Wei, He Su, Juan Yang, Jun Qian, Ran Xu, Baosheng Liao, Liang Shen, Mingli Wu, Ruiyang Cheng, Shilin Chen

The paper shows that inoculating soil with Bacillus subtilis 50-1 reduces Fusarium infection and alleviates replanting problems in Panax ginseng.

bioRxiv · May 29, 2017 · PreprintMicrobiology