Author

Jonas Zimmermann

Botanic Garden and Botanical Museum BerlinORCID 0000-0002-0522-0569Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Ecology· 1 Molecular Biology· 1

Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 2 Assay:metagenomics· 2 Research Focus:database / resource· 1 Research Focus:ecology & biodiversity· 1 Approach:experimental assay· 1 Research Focus:software / tool· 1 Approach:statistical model· 1

Frequent Co-Authors

Agnès BoucheziD· 1 shared Ana BaričevićiD· 1 shared Arne J. BeermanniD· 1 shared Chardon Cécile· 1 shared Daniela Marić PfannkucheniD· 1 shared Demetrio MoraiD· 1 shared Florian LeeseiD· 1 shared Frédéric RimetiD· 1 shared

Activity by Year

2022-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 20 mutual co-author links

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1 shared paperMolecular Biology

Agnès BouchezORCID

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Author profile →

2 papers

Recent·Most cited

eDNA metabarcoding provides scalable and continuous biodiversity monitoring across the tree of life

Till‐Hendrik Macher, Robin Schütz, Jens Arle, Arne J. Beermann, Peter Haase, Jan Koschorreck, Henrik Krehenwinkel, Demetrio Mora, James S. Sinclair, Jonas Zimmermann, Florian Leese

This study uses eDNA metabarcoding to monitor biodiversity across aquatic habitats, finding it provides more species data at lower cost than traditional methods.

Ecological Indicators · Aug 14, 2026Peer-reviewedEcology

Best practice recommendations for sample preservation in metabarcoding studies: a case study on diatom environmental samples

Ana Baričević, Chardon Cécile, Maria Kahlert, Satu Maaria Karjalainen, Daniela Marić Pfannkuchen, Pfannkuchen Martin, Frédéric Rimet, Mirta Smodlaka Tanković, T La Rosa, Valentin Vasselon, Jonas Zimmermann, Agnès Bouchez

This study compares three preservation protocols for diatom samples over different storage durations, finding that DNA quality and diversity are largely unaffected, but rare taxa vary, highlighting the importance of method choice for detecting low-density species.

bioRxiv · May 4, 2022 · PreprintMolecular Biology