Xuyang Liu

UF-Symmetry improves prediction of large protein complexes by leveraging symmetry, achieving faster computation and better accuracy than existing methods.

PyTorch reimplementation of AlphaFold and AlphaFold-Multimer with training code, retrained from scratch to equal or better accuracy, about 2.2 times faster training and roughly 2% higher multimer TM-Score.

The paper improves protein contact map prediction for sequences with few homologs by using consistency learning on reduced multiple sequence alignments.