Author

Fen Wu

New York UniversityORCID 0000-0002-0563-5887Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:gene regulatory network inference· 2 Research Focus:variant calling· 2 Research Focus:cell-cell communication· 1 Approach:experimental assay· 1 Research Focus:genome assembly· 1 Research Focus:GWAS / association mapping· 1 Assay:metagenomics· 1 Approach:statistical model· 1

Frequent Co-Authors

Alejandro PirontiiD· 1 shared Boyan ZhouiD· 1 shared Caiyun CaoiD· 1 shared Chan WangiD· 1 shared Gregory PutzeliD· 1 shared Hong ChengiD· 1 shared Huilin LiiD· 1 shared Jiabao SuniD· 1 shared

Activity by Year

2024-2024 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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1 shared paperBioinformatics

Alejandro PirontiORCID

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2 papers

Recent·Most cited

The first near-complete genome assembly of pig: enabling more accurate genetic research

Caiyun Cao, Jian Miao, Qinqin Xie, Jiabao Sun, Hong Cheng, Zhenyang Zhang, Fen Wu, Shuang Liu, Xiaowei Ye, Zhe Zhang, Qishan Wang, Yuchun Pan, Zhen Wang

This paper presents a near-complete pig genome assembly, improving upon the existing reference by closing gaps and enhancing gene prediction, which supports better genetic research and applications.

bioRxiv · Oct 13, 2024 · PreprintGenomics

An integrated strain-level analytic pipeline utilizing longitudinal metagenomic data

Boyan Zhou, Chan Wang, Gregory Putzel, Jiyuan Hu, Menghan Liu, Fen Wu, Yu Chen, Alejandro Pironti, Huilin Li

LongStrain improves strain-level analysis in longitudinal metagenomic data by jointly modeling strain proportions and genomic variants, outperforming existing methods in variant calling and proportion estimation.

Microbiology Spectrum · Sep 23, 2024Peer-reviewedBioinformatics