Author

Daniel Rodríguez

Columbia University Irving Medical CenterORCID 0000-0002-0582-3466Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Biophysics· 1

Signature Assays, Organisms & Methods

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Organism:bacteria (other)· 1 Approach:deep learning· 1 Approach:machine learning (classical)· 1 Research Focus:protein design· 1 Assay:protein structure· 1 Research Focus:protein structure prediction· 1 Research Focus:software / tool· 1 Organism:virus· 1

Frequent Co-Authors

Anum Azam GlasgowiD· 1 shared Belen Sundberg· 1 shared Kyle C. WeberiD· 1 shared

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2024-2024 · peak 1/yr

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3 top collaborators · 3 mutual co-author links

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1 shared paperBiophysics

Anum Azam GlasgowORCID

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1 paper

Recent·Most cited

BiophysicsProtein SciencePeer-reviewedJul 11, 2024

✦ In-depth digest

MAGPIE: an interactive tool for visualizing and analyzing protein-ligand interactions

Daniel Rodríguez, Kyle C. Weber, Belen Sundberg, Anum Azam Glasgow

MAGPIE aligns many protein complexes on a shared ligand and shows binder residues in interactive 3D, with amino acid frequency graphs and DBSCAN-derived interaction hotspots.

4 citations

virusbacteria (other)

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