Author

Samson Koelle

Allen Institute for Brain ScienceORCID 0000-0002-0722-2189Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Neuroscience· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 1 Approach:experimental assay· 1 Organism:human· 1 Organism:mouse· 1 Organism:multiple species· 1 Research Focus:software / tool· 1 Assay:spatial transcriptomics· 1 Approach:statistical model· 1

Frequent Co-Authors

Chuanfeng WuiD· 1 shared Cynthia E. DunbariD· 1 shared Dana MastrovitoiD· 1 shared Diego A. EspinozaiD· 1 shared Hongkui ZengiD· 1 shared Jennifer D. WhiteselliD· 1 shared Julie A. HarrisiD· 1 shared Karla E. HirokawaiD· 1 shared

Activity by Year

2021-2023 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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1 shared paperBioinformatics

Chuanfeng WuORCID

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2 papers

Recent·Most cited

Modeling the cell-type specific mesoscale murine connectome with anterograde tracing experiments

Samson Koelle, Dana Mastrovito, Jennifer D. Whitesell, Karla E. Hirokawa, Hongkui Zeng, Marina Meilă, Julie A. Harris, Ştefan Mihalaş

This paper fills gaps in cell-class specific connectivity data using a statistical model and kernel learning method, producing a mesoscale mouse brain connectivity matrix.

Network Neuroscience · Jan 1, 2023Peer-reviewedNeuroscience

barcodetrackR: an R package for the interrogation of clonal tracking data

Diego A. Espinoza, Ryland D. Mortlock, Samson Koelle, Chuanfeng Wu, Cynthia E. Dunbar

barcodetrackR provides tools for analyzing clonal tracking data to study lineage reconstitution and clonal dynamics in gene and cell therapy studies.

Nature Computational Science · Apr 26, 2021Peer-reviewedBioinformatics