Author

David J. Dilworth

Joint Genome InstituteORCID 0000-0002-0806-0302Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Approach:experimental assay· 2 Organism:plant (other)· 2 Assay:DNA methylation· 1 Research Focus:gene regulatory network inference· 1 Research Focus:genome assembly· 1 Research Focus:variant calling· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Abraham Morales‐CruziD· 1 shared Alexis GarretsoniD· 1 shared Anna LipzeniD· 1 shared Catherine R. NelsoniD· 1 shared Chris G. DaumiD· 1 shared Cindy CheniD· 1 shared Dario CopettiiD· 1 shared David A. KudrnaiD· 1 shared

Activity by Year

2019-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 20 mutual co-author links

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1 shared paperGenomics

Abraham Morales‐CruzORCID

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2 papers

Recent·Most cited

Recruitment, rewiring, and deep conservation in flowering plant gene regulation

Leo A. Baumgart, Sharon I. Greenblum, Abraham Morales‐Cruz, Peng Wang, Yu Zhang, Lin Yang, Cindy Chen, David J. Dilworth, Alexis Garretson, Nicolas Grosjean, Guifen He, Emily Savage, Yuko Yoshinaga, Ian K. Blaby, Chris G. Daum, Ronan C. O’Malley

The paper presents a scalable TFBS assay to create an atlas of 3,000 genome-wide binding site maps for 360 TFs across 10 flowering plant species, revealing conservation and rewiring of regulatory elements.

Nature Plants · Jul 15, 2025Peer-reviewedGenomics

Genome sequence of the model rice variety KitaakeX

Rashmi Jain, Jerry W. Jenkins, Shengqiang Shu, Mawsheng Chern, Joel Martin, Dario Copetti, Phat Q. Duong, Nikki T. Pham, David A. Kudrna, Jayson Talag, Wendy Schackwitz, Anna Lipzen, David J. Dilworth, Diane Bauer, Jane Grimwood, , Pamela C. Ronald

The paper reports the de novo genome sequencing and analysis of the rice variety KitaakeX, identifying genomic variations and providing a high-quality reference for rice functional genomics.

BMC Genomics · Nov 27, 2019Peer-reviewedGenomics