Author

Kristi Briggs

Johns Hopkins UniversityORCID 0000-0002-0947-3686Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 2 Organism:human· 2 Assay:bulk RNA-seq· 1 Research Focus:cell-cell communication· 1 Assay:CITE-seq· 1 Research Focus:clustering· 1 Approach:deep learning· 1 Research Focus:differential expression· 1

Frequent Co-Authors

Joanna MeliaiD· 2 shared Alyssa M. ParianiD· 1 shared Amanda Kwok· 1 shared Amir Hossein DaraieiD· 1 shared April Yan· 1 shared Beiya Xu· 1 shared Carl HarrisiD· 1 shared Casey Overby TayloriD· 1 shared

Activity by Year

2025-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 27 mutual co-author links

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2 shared papersImmunology

Joanna MeliaORCID

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2 papers

Recent·Most cited

ImmunologyInflammatory Bowel DiseasesPeer-reviewedMar 13, 2026

Longitudinal TCR repertoires in ulcerative colitis patients show features distinguishing disease states

Sabahat Rahman, Beiya Xu, Matthew Farah…·Kristi Briggs

This study analyzes TCR repertoires from ulcerative colitis patients over time, identifying Vβ gene usage and K-mer enrichment differences between flare and remission states.

DOI 10.1093/ibd/izag039

humanCITE-seq

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ImmunologybioRxivPreprintJan 13, 2025

Longitudinal T cell repertoire analysis reveals dynamic clonal T cell populations in Ulcerative Colitis

Kristi Briggs, Jessica Lin, Lara Chaaban…·Joanna Melia

This study analyzes the TCR repertoire in UC patients over time, finding most do not share persistent clones, while a subset has persistent clones linked to more active disease.

1 citation

humanbulk RNA-seq

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