Author

Kwangmoon Park

University of Wisconsin–MadisonORCID 0000-0002-0987-923XUnclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Genomics· 3

Signature Assays, Organisms & Methods

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Approach:statistical model· 3 Research Focus:benchmarking· 1 Research Focus:clustering· 1 Research Focus:dimensionality reduction· 1 Assay:DNA methylation· 1 Research Focus:gene regulatory network inference· 1 Assay:Hi-C· 1 Organism:human· 1

Frequent Co-Authors

Sündüz KeleşiD· 3 shared Emery H. BresnickiD· 1 shared Jingwen YaniD· 1 shared Ruiqi LiaoiD· 1 shared Tianchuan Gao· 1 shared Zhongxuan SuniD· 1 shared

Activity by Year

2024-2026 · peak 1/yr

Co-Author Collaboration Network

6 top collaborators · 9 mutual co-author links

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3 shared papersGenomics

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3 papers

Recent·Most cited

GenomicsNature CommunicationsPeer-reviewedJun 2, 2026

MINTsC learns multi-way chromatin interactions from single cell high throughput chromatin conformation data

Kwangmoon Park, Tianchuan Gao, Jingwen Yan, Sündüz Keleş

MINTsC identifies multi-way chromatin interactions from scHi-C data, revealing gene regulation by multiple enhancers and reducing multiple-testing burden in molecular QTL studies.

DOI 10.1038/s41467-026-73773-y

humanHi-C

𝕏 PostBluesky

GenomicsbioRxivPreprintMay 12, 2025

Systematic Background Selection for Enhanced Contrastive Dimension Reduction

Kwangmoon Park, Zhongxuan Sun, Ruiqi Liao…·Sündüz Keleş

This paper introduces BasCoD, a framework for selecting optimal backgrounds in contrastive dimension reduction, improving contrast and interpretability in single-cell data.

DOI 10.1101/2025.05.12.653541

scRNA-seqstatistical model

𝕏 PostBluesky

GenomicsJournal of the American Statistical AssociationPeer-reviewedMay 21, 2024

Joint tensor modeling of single cell 3D genome and epigenetic data with Muscle

Kwangmoon Park, Sündüz Keleş

Muscle jointly models single cell 3D genome and DNA methylation data to improve cell type delineation and modality associations.

4 citations

scATAC-seqDNA methylation

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