Author

Alexandros Tsakogiannis

Hellenic Centre for Marine ResearchORCID 0000-0002-1062-6459Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Genomics· 3

Signature Assays, Organisms & Methods

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Assay:whole-genome sequencing· 3 Approach:experimental assay· 2 Research Focus:genome assembly· 2 Organism:multiple species· 1 Approach:statistical model· 1 Research Focus:variant calling· 1

Frequent Co-Authors

Costas S. TsigenopoulosiD· 3 shared Tereza ManousakiiD· 3 shared Jon Bent KristofferseniD· 2 shared Anna Kristina SonessoniD· 1 shared Antoniοs Magoulas· 1 shared Carolina PeñalozaiD· 1 shared Constantinos Batargias· 1 shared Constantinos C. MylonasiD· 1 shared

Activity by Year

2020-2022 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 27 mutual co-author links

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3 shared papersGenomics

Costas S. TsigenopoulosORCID

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3 papers

Recent·Most cited

GenomicsbioRxivPreprintOct 4, 2022

Chromosome assembly for the meagre, Argyrosomus regius, reveals species adaptations and sciaenid sex-related locus evolution

Vasileios Papadogiannis, Tereza Manousaki, Orestis Nousias…·Costas S. Tsigenopoulos

This paper presents the first complete genome assembly for the meagre, Argyrosomus regius, and identifies loci related to immune, fat metabolism, and growth adaptations, as well as sex-related genomic changes in Sciaenidae.

DOI 10.1101/2022.10.04.510760

multiple specieswhole-genome sequencing

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GenomicsGenomicsPeer-reviewedApr 30, 2021

Development and validation of a combined species SNP array for the European seabass (Dicentrarchus labrax) and gilthead seabream (Sparus aurata)

Carolina Peñaloza, Tereza Manousaki, Rafaella Franch…·Costas S. Tsigenopoulos

The paper develops and validates a combined-species SNP array for European seabass and gilthead seabream to enable high-throughput genotyping for genomic selection and population studies.

56 citationstop 2%

whole-genome sequencingstatistical model

𝕏 PostBluesky

GenomicsbioRxivPreprintFeb 17, 2020

Building a high-quality reference genome assembly for the eastern Mediterranean Sea invasive sprinter Lagocephalus sceleratus (Tetraodontiformes, Tetraodontidae)

Theodoros Danis, Alexandros Tsakogiannis, Jon Bent Kristoffersen…·Tereza Manousaki

This study assembles a high-quality genome for the invasive silver-cheeked toadfish using MinION and Illumina data, achieving 98% BUSCO completeness.

2 citations

whole-genome sequencingexperimental assay

𝕏 PostBluesky