Author

Danie B. Kinkade

Woods Hole Oceanographic InstitutionORCID 0000-0002-1134-7347Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Genomics· 1 Systems Biology· 1

Signature Assays, Organisms & Methods

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Research Focus:database / resource· 2 Assay:metagenomics· 2 Assay:proteomics· 2 Research Focus:cell type annotation· 1 Organism:human· 1 Organism:mouse· 1 Organism:rat· 1 Approach:statistical model· 1

Frequent Co-Authors

Adam ShepherdiD· 2 shared Christopher L. DupontiD· 2 shared David A. GaylordiD· 2 shared Jaclyn K. SaundersiD· 2 shared Mak A. SaitoiD· 2 shared Nicholas SymmondsiD· 2 shared Noelle A. HeldiD· 2 shared Amber YorkiD· 1 shared

Activity by Year

2020-2020 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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2 shared papersGenomics

Adam ShepherdORCID

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2 papers

Recent·Most cited

GenomicsJournal of Proteome ResearchPeer-reviewedSep 8, 2020

METATRYP v 2.0: Metaproteomic Least Common Ancestor Analysis for Taxonomic Inference Using Specialized Sequence Assemblies - Standalone Software and Web Servers for Marine Microorganisms and Coronaviruses

Jaclyn K. Saunders, David A. Gaylord, Noelle A. Held…·Mak A. Saito

METATRYP v2 identifies shared peptides across organisms in metaproteomics to improve taxonomic attribution, showing low peptide sharing among marine microbes and coronaviruses.

23 citations

humanmouse

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Systems BiologyJournal of Proteome ResearchPeer-reviewedSep 8, 2020

Development of an Ocean Protein Portal for Interactive Discovery and Education

Mak A. Saito, Jaclyn K. Saunders, Michael Chagnon…·Danie B. Kinkade

The paper develops the Ocean Protein Portal (OPP) to address big-data challenges in marine microbial proteomics by enabling data sharing, discovery, and educational use through interactive visualizations and metadata links.

12 citations

metagenomicsproteomics

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