Author

Simon Liu

National Human Genome Research InstituteORCID 0000-0002-1182-5492Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Genetic & Genomic Medicine· 1

Signature Assays, Organisms & Methods

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Approach:deep learning· 2 Organism:human· 2 Research Focus:cell type annotation· 1 Assay:imaging· 1 Research Focus:protein design· 1 Assay:protein sequence· 1 Research Focus:sequence-to-function modeling· 1 Approach:transformer / foundation model· 1

Frequent Co-Authors

Ananthan NambiariD· 1 shared Anna RitziD· 1 shared Benjamin D. SolomoniD· 1 shared Cedrik Tekendo‐NgongangiD· 1 shared Dat DuongiD· 1 shared Maeve Heflin· 1 shared Mark Hopkins· 1 shared Ping HuiD· 1 shared

Activity by Year

2020-2022 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 20 mutual co-author links

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1 shared paperBioinformatics

Ananthan NambiarORCID

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2 papers

Recent·Most cited

Genetic & Genomic MedicineFrontiers in GeneticsPeer-reviewedApr 11, 2022

Neural networks for classification and image generation of aging in genetic syndromes

Dat Duong, Ping Hu, Cedrik Tekendo‐Ngongang…·Rebekah L. Waikel

This paper develops a neural network classifier to diagnose genetic syndromes from facial images across different age groups, showing improved accuracy over clinical geneticists.

29 citations

humanimaging

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BioinformaticsbioRxivPreprintJun 15, 2020

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Transforming the Language of Life: Transformer Neural Networks for Protein Prediction Tasks

Ananthan Nambiar, Simon Liu, Mark Hopkins…·Anna Ritz

A RoBERTa-style Transformer, pre-trained on 450K Swiss-Prot sequences in 18 hours on 4 V100 GPUs, rivals DeepFam at family classification and beats PIPR at human protein-protein interaction prediction.

54 citations

humanyeast

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