Maximilian Miller

Snow Microbiome Functional Analyses Reveal Novel Microbial Metabolism of Complex Organic Compounds

The paper analyzes snow microbiome metagenomes and metatranscriptomes to reveal functional diversity and activity, finding higher diversity in early spring and correlations between microbial pathways and organic acid levels.

Bio-Node - Bioinformatics in the Cloud

Bio-Node is a cloud-based platform for bioinformatics analysis that improves performance, cost, and reproducibility of workflows through automated clustering and metagenome annotation.

Identifying Crohns disease signal from variome analysis

This paper introduces AVA,Dx, a machine learning method using whole exome sequencing to predict Crohn's disease status with 71% precision and 73% recall.

fuNTRp: Identifying protein positions for variation driven functional tuning

The paper introduces funtrp, a method to classify protein positions as neutral, rheostat, or toggle based on mutational impact, showing these types correlate with functional effects and improve variant effect prediction.

fusionDB: assessing microbial diversity and environmental preferences via functional similarity networks

fusionDB links microbial functions to environmental metadata through functional similarity networks, enabling comparisons and identification of horizontal gene transfer events.