Author

Gabriel Alexander Vignolle

AIT Austrian Institute of Technology GmbHORCID 0000-0002-1369-5150Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 2 Microbiology· 2

Signature Assays, Organisms & Methods

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Research Focus:gene regulatory network inference· 2 Approach:statistical model· 2 Assay:whole-genome sequencing· 2 Research Focus:benchmarking· 1 Research Focus:cell type annotation· 1 Approach:deep learning· 1 Approach:experimental assay· 1 Research Focus:genome assembly· 1

Frequent Co-Authors

Astrid Rosa Mach-AigneriD· 4 shared Robert Ludwig MachiD· 4 shared Christian Derntl· 3 shared Chin Mei Chan· 1 shared Christian ZimmermanniD· 1 shared Denise Schaffer· 1 shared Domenico SavioiD· 1 shared Feng M. CaiiD· 1 shared

Activity by Year

2021-2025 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 27 mutual co-author links

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4 shared papersMicrobiology

Astrid Rosa Mach-AignerORCID

Mutual co-authors in cluster

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4 papers

Recent·Most cited

MicrobiologyBMC MicrobiologyPeer-reviewedAug 21, 2025

Genome sequencing and physiological characterization of three Neoarthrinium moseri strains

Nadine J. Hochenegger, Gabriel Alexander Vignolle, Matthias Schmal…·Christian Zimmermann

This study sequenced the genomes of three Neoarthrinium moseri strains and characterized their metabolic potential, revealing high biosynthetic gene clusters and ecological versatility.

DOI 10.1186/s12866-025-04274-z

whole-genome sequencingexperimental assay

𝕏 PostBluesky

MicrobiologybioRxivPreprintJul 21, 2025

Dark matter of an orchid: metagenome of the microbiome associated with the rhizosphere of Dactylorhiza traunsteineri

Gabriel Alexander Vignolle, Leopold Zehetner, Christian Derntl…·Julien Charest

The paper analyzes the microbiome of the endangered orchid Dactylorhiza traunsteineri, identifying key bacterial phyla and revealing metabolic potential in its rhizosphere.

DOI 10.1101/2025.07.21.665863

plant (other)metagenomics

𝕏 PostBluesky

BioinformaticsbioRxivPreprintJan 10, 2022

FunOrder 2.0 - a fully automated method for the identification of co-evolved genes

Gabriel Alexander Vignolle, Robert Ludwig Mach, Astrid Rosa Mach-Aigner, Christian Derntl

FunOrder 2.0 automates the identification of co-evolved genes, improving speed and specificity over its semi-automated predecessor.

DOI 10.1101/2022.01.10.475597

protein sequencestatistical model

𝕏 PostBluesky

BioinformaticsbioRxivPreprintJan 29, 2021

The Functional Order (FunOrder) tool - Identification of essential biosynthetic genes through computational molecular co-evolution

Gabriel Alexander Vignolle, Denise Schaffer, Robert Ludwig Mach…·Christian Derntl

The paper introduces FunOrder, a tool that identifies essential biosynthetic genes in BGCs using computational molecular co-evolution, improving upon existing methods that struggle with distinguishing essential genes from gap genes.

4 citations

whole-genome sequencingstatistical model

𝕏 PostBluesky