Author

Wenzheng Bao

Xuzhou University of TechnologyORCID 0000-0002-1471-5432Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1

Signature Assays, Organisms & Methods

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Assay:ChIP-seq· 1 Approach:deep learning· 1 Assay:DNA methylation· 1 Research Focus:gene regulatory network inference· 1 Approach:transformer / foundation model· 1

Frequent Co-Authors

De-Shuang HuangiD· 1 shared Qinhu ZhangiD· 1 shared Siguo WangiD· 1 shared Wenjian Liu· 1 shared Zhipeng LiiD· 1 shared

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2026-2026 · peak 1/yr

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1 shared paperBioinformatics

De-Shuang HuangORCID

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1 paper

Recent·Most cited

BioinformaticsGenome ResearchPeer-reviewedJan 16, 2026

A scalable computational framework for predicting gene expression from candidate cis-regulatory elements

Qinhu Zhang, Siguo Wang, Zhipeng Li…·De-Shuang Huang

This paper introduces ScPGE, a framework predicting gene expression from cis-regulatory elements using convolutional neural networks and transformers, showing improved accuracy in identifying enhancer-gene interactions.

DOI 10.1101/gr.281219.125

DNA methylationChIP-seq

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