Author

Zhipeng Li

Eastern Institute of Technology, NingboORCID 0000-0002-4135-0838Unclaimed ORCID profile · follow to get notified of new preprints

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Zhipeng Li1 paper · Guizhou University

Biology Disciplines

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Bioinformatics· 2

Signature Assays, Organisms & Methods

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Assay:ChIP-seq· 2 Approach:deep learning· 2 Assay:DNA methylation· 2 Research Focus:gene regulatory network inference· 2 Approach:contrastive learning· 1 Research Focus:differential expression· 1 Organism:human· 1 Organism:mouse· 1

Frequent Co-Authors

Qinhu ZhangiD· 2 shared Siguo WangiD· 2 shared De-Shuang HuangiD· 1 shared De‐Shuang Huang· 1 shared Wenjian Liu· 1 shared Wenzheng BaoiD· 1 shared Yijie PaniD· 1 shared

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2024-2026 · peak 1/yr

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7 top collaborators · 15 mutual co-author links

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2 shared papersBioinformatics

Qinhu ZhangORCID

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2 papers

Recent·Most cited

BioinformaticsGenome ResearchPeer-reviewedJan 16, 2026

A scalable computational framework for predicting gene expression from candidate cis-regulatory elements

Qinhu Zhang, Siguo Wang, Zhipeng Li…·De-Shuang Huang

This paper introduces ScPGE, a framework predicting gene expression from cis-regulatory elements using convolutional neural networks and transformers, showing improved accuracy in identifying enhancer-gene interactions.

DOI 10.1101/gr.281219.125

DNA methylationChIP-seq

BioinformaticsAdvanced SciencePeer-reviewedJul 30, 2024

Cross-species prediction of transcription factor binding by adversarial training of a novel nucleotide-level deep neural network

Qinhu Zhang, Siguo Wang, Zhipeng Li…·De‐Shuang Huang

This study introduces a novel deep neural network for cross-species TF binding prediction and improves performance through adversarial training.

14 citations