Author

Clément Carré

ORCID 0000-0002-1674-1781Unclaimed ORCID profile · follow to get notified of new preprints

Additional preprints under this name without ORCID

Clément Carré1 paper · Centre National de la Recherche Scientifique

Biology Disciplines

Click to filter author papers

Bioinformatics· 2

Signature Assays, Organisms & Methods

Click to filter · or open tag

Organism:Arabidopsis· 1 Research Focus:gene regulatory network inference· 1 Approach:machine learning (classical)· 1 Research Focus:protein design· 1 Assay:protein structure· 1 Assay:scRNA-seq· 1 Approach:transformer / foundation model· 1

Frequent Co-Authors

Gabriel KroukiD· 2 shared André MasiD· 1 shared Antoine Liutkus AiD· 1 shared Baldwin DumortieriD· 1 shared Jean-Baptiste CarlueriD· 1 shared Laura SteinmanniD· 1 shared

Activity by Year

2022-2024 · peak 1/yr

Co-Author Collaboration Network

6 top collaborators · 9 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

2 shared papersBioinformatics

Gabriel KroukORCID

Mutual co-authors in cluster

Author profile →

2 papers

Recent·Most cited

BioinformaticsbioRxivPreprintApr 17, 2024

Classification and Regression Trees to predict Transcription Factor Combinatorial Interaction in scRNA-seq data.

Jean-Baptiste Carluer, Laura Steinmann, Clément Carré…·Gabriel Krouk

The paper uses Classification and Regression Trees to predict transcription factor combinatorial interactions in scRNA-seq data from Arabidopsis thaliana roots.

DOI 10.1101/2024.04.17.589552

ArabidopsisscRNA-seq

𝕏 PostBluesky

BioinformaticsbioRxivPreprintAug 10, 2022

PeTriBERT : Augmenting BERT withtridimensional encoding for inverse protein foldingand design

Baldwin Dumortier, Antoine Liutkus A, Clément Carré, Gabriel Krouk

The paper introduces PeTriBERT, a Transformer model augmented with 3D structural data to predict amino-acid sequences from protein structures, demonstrating its ability to generate novel proteins with GFP-like structures.

5 citations

protein structuretransformer / foundation model

𝕏 PostBluesky