Author

Lavanya Singh

Stellenbosch UniversityORCID 0000-0002-1726-4454Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Genetic & Genomic Medicine· 1 Genomics· 1

Signature Assays, Organisms & Methods

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Organism:virus· 2 Assay:whole-genome sequencing· 2 Approach:experimental assay· 1 Research Focus:phylogenetics / evolution· 1 Approach:statistical model· 1 Research Focus:variant calling· 1

Frequent Co-Authors

Eduan WilkinsoniD· 2 shared Houriiyah TegallyiD· 2 shared James Emmanuel SaniD· 2 shared Jennifer GiandhariiD· 2 shared Richard J. LessellsiD· 2 shared Sureshnee PillayiD· 2 shared Túlio de OliveiraiD· 2 shared Abay SisayiD· 1 shared

Activity by Year

2020-2023 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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2 shared papersGenetic & Genomic Medicine

Eduan WilkinsonORCID

Mutual co-authors in cluster

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2 papers

Recent·Most cited

Molecular Epidemiology and Diversity of SARS-CoV-2 in Ethiopia, 2020-2022

Abay Sisay, Derek Tshiabuila, Abraham Tesfaye, Gerald Mboowa, Samuel O. Oyola, Sofonias Kifle Tessema, Cheryl Baxter, Darren Martin, Richard J. Lessells, Houriiyah Tegally, Stephanie van Wyk, Monika Moir, Jennifer Giandhari, Sureshnee Pillay, Lavanya Singh, , James Emmanuel San

This study analyzes SARS-CoV-2 genomic data from Ethiopia to understand its introduction, spread, and evolution during the first four waves of the pandemic.

Genes · Mar 13, 2023Peer-reviewedGenetic & Genomic Medicine

Whole Genome Sequencing of SARS-CoV-2: Adapting Illumina Protocols for Quick and Accurate Outbreak Investigation During a Pandemic

Sureshnee Pillay, Jennifer Giandhari, Houriiyah Tegally, Eduan Wilkinson, Benjamin Chimukangara, Richard J. Lessells, Mahomed‐Yunus S. Moosa, Stacey A. Mattison, Inbal Gazy, Maryam Fish, Lavanya Singh, Khulekani Sedwell Khanyile, James Emmanuel San, Vagner Fonseca, Marta Giovanetti, , Túlio de Oliveira

This paper describes adapting Illumina protocols for rapid and accurate SARS-CoV-2 whole genome sequencing during a hospital outbreak, reducing library prep time and sharing protocols with a genomics surveillance network.

Genes · Aug 17, 2020Peer-reviewedGenomics