Author

Josep Ramoneda

Consejo Superior de Investigaciones CientíficasORCID 0000-0002-1806-2889Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Microbiology· 2 Ecology· 1

Signature Assays, Organisms & Methods

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Organism:bacteria (other)· 3 Approach:statistical model· 3 Research Focus:benchmarking· 1 Research Focus:ecology & biodiversity· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1 Assay:metagenomics· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Alberto Pascual‐GarcíaiD· 1 shared Andres Francesch-Vazquez· 1 shared Anna Comas-Pujol· 1 shared Ashish A. MalikiD· 1 shared Chujin RuaniD· 1 shared Daniel C. AngstiD· 1 shared David R. JohnsoniD· 1 shared Deepthi P VinodiD· 1 shared

Activity by Year

2026-2026 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 13 mutual co-author links

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1 shared paperEcology

Alberto Pascual‐GarcíaORCID

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

A life-history axis of resource acquisition in bacteria: depolymerisation versus uptake

Yingyi Fu, Luciana Chávez Rodríguez, Josep Ramoneda, Katherine L. Shek, Jennifer B. H. Martiny, Steven Allison, Yu Luo, Ashish A. Malik

The paper develops a genomic ratio to quantify resource-acquisition strategies in bacteria, finding uptake-optimised bacteria dominate early decomposition and depolymerisation-optimised bacteria dominate later stages.

bioRxiv · Oct 26, 2026 · PreprintMicrobiology

Environmental sensing capacity predicts bacterial ecological strategies and environmental preferences

Roman S. Altxu, Gauri Shankar, Anna Comas-Pujol, Andres Francesch-Vazquez, Alberto Pascual‐García, Tino Krell, Josep Ramoneda

This study links bacterial environmental sensing capacity to ecological strategies and environmental preferences by analyzing sensor domains across genomes and metagenomes.

bioRxiv · Sep 3, 2026 · PreprintEcology

Plasmid transfer and loss probabilities interactively determine antibiotic resistance spread in surface-associated bacterial biomass

Josep Ramoneda, Deepthi P Vinod, Yinyin Ma, Chujin Ruan, Julian Schmidt, Michael Manhart, Daniel C. Angst, David R. Johnson

The paper models and experimentally tests how plasmid transfer and loss probabilities influence antibiotic resistance spread between colliding bacterial colonies.

bioRxiv · Jan 8, 2026 · PreprintMicrobiology