Author

Shohei Shimizu

Shiga UniversityORCID 0000-0002-1931-0733Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 2 Approach:statistical model· 2 Approach:Bayesian inference· 1 Research Focus:benchmarking· 1 Research Focus:clustering· 1 Research Focus:database / resource· 1 Research Focus:differential expression· 1 Assay:electronic health records· 1

Frequent Co-Authors

Hiroshi YokoyamaiD· 1 shared Kyoshiro HikiiD· 1 shared Michio YamamotoiD· 1 shared Ryosuke F. TakeuchiiD· 1 shared Takehiko I. HayashiiD· 1 shared Thong PhamiD· 1 shared

Activity by Year

2025-2026 · peak 1/yr

Co-Author Collaboration Network

6 top collaborators · 7 mutual co-author links

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1 shared paperNeuroscience

Hiroshi YokoyamaORCID

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2 papers

Recent·Most cited

Causal Discovery of Synchronous Neural Oscillations based on Jacobian-informed VAR-LiNGAM

Hiroshi Yokoyama, Ryosuke F. Takeuchi, Shohei Shimizu

This paper introduces j-VAR-LiNGAM, a causal discovery method for synchronous neural oscillations, and shows it identifies causal hierarchies in brain networks using synthetic and empirical data.

bioRxiv · May 1, 2026 · PreprintNeuroscience

Statistical Causal Discovery in Developing and Refining Adverse Outcome Pathway (AOP)

Kyoshiro Hiki, Thong Pham, Michio Yamamoto, Takehiko I. Hayashi, Shohei Shimizu

This paper applies statistical causal discovery to ecotoxicology data to improve adverse outcome pathway models by identifying causal relationships and handling missing data.

bioRxiv · Aug 31, 2025 · PreprintBiochemistry