Characterising the microbial and antimicrobial resistance signatures of hospital-acquired pneumonia using nanopore metagenomic sequencing
Cedric C.S. Tan, Alp Aydin, Dewi R Owen, Sylvia Rofael, David A. Brealey, Mark John Peters, Themoula Charalampous, John Robert Hurst, Timothy Daniel McHugh, David M. Livermore, Vanya A. Gant, Justin O’Grady, François Balloux, Lucy van Dorp, Virve I. Enne
This study uses nanopore metagenomic sequencing to analyze the microbiomes of HAP patients, revealing high fungal prevalence and multi-drug-resistant microbes.
bioRxiv · Aug 9, 2025 · PreprintMicrobiology