Author

Trung Bao Nguyen

University of AucklandORCID 0000-0002-1990-8647Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 1 Approach:deep learning· 1 Research Focus:GWAS / association mapping· 1 Assay:GWAS summary statistics· 1 Approach:transformer / foundation model· 1

Frequent Co-Authors

Alex GavryushkiniD· 1 shared Diana Benavides‐PradoiD· 1 shared Kieran ElmesiD· 1 shared Megan LeaskiD· 1 shared Michael WitbrockiD· 1 shared Neşet Özkan TaniD· 1 shared Nicholas A. SumpteriD· 1 shared

Activity by Year

2022-2022 · peak 1/yr

Co-Author Collaboration Network

7 top collaborators · 21 mutual co-author links

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1 shared paperBioinformatics

Alex GavryushkinORCID

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1 paper

Recent·Most cited

SNVformer: An Attention-based Deep Neural Network for GWAS Data

Kieran Elmes, Diana Benavides‐Prado, Neşet Özkan Tan, Trung Bao Nguyen, Nicholas A. Sumpter, Megan Leask, Michael Witbrock, Alex Gavryushkin

This paper introduces SNVformer, a Transformer-based model for GWAS data that predicts gout from SNVs with 83% AUROC, showing promise for scalable genotype-phenotype association analysis.

bioRxiv · Jul 7, 2022 · PreprintBioinformatics