Author

Sandeep Kumar Kushwaha

National Institute of Animal BiotechnologyORCID 0000-0002-1998-1430Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Genomics· 1

Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 2 Research Focus:differential expression· 2 Approach:statistical model· 2 Organism:fungi (other)· 1 Organism:human· 1 Research Focus:protein structure prediction· 1

Frequent Co-Authors

Anders BrobergiD· 1 shared Dan Funck JenseniD· 1 shared Edoardo PiomboiD· 1 shared Magnus KarlssoniD· 1 shared Mukesh K. DubeyiD· 1 shared Pruthvi Balachandra KalyandurgiD· 1 shared Ramesh Raju VetukuriiD· 1 shared Samraggi ChoudhuryiD· 1 shared

Activity by Year

2020-2021 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 24 mutual co-author links

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1 shared paperGenomics

Anders BrobergORCID

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2 papers

Recent·Most cited

The role of Dicer-dependent RNA interference in regulating cross-species communication during fungus-fungus interactions

Edoardo Piombo, Ramesh Raju Vetukuri, Anders Broberg, Pruthvi Balachandra Kalyandurg, Sandeep Kumar Kushwaha, Dan Funck Jensen, Magnus Karlsson, Mukesh K. Dubey

This study investigates the role of Dicer-dependent RNA interference in mycoparasitism by analyzing transcriptome and secondary metabolome changes in a dcl2 mutant of Clonostachys rosea, revealing cross-species regulatory functions of fungal small RNAs.

Microbiology Spectrum · Sep 22, 2021Peer-reviewedGenomics

SARS-CoV-2 transcriptome analysis and molecular cataloguing of immunodominant epitopes for multi-epitope based vaccine design

Sandeep Kumar Kushwaha, Veerbhan Kesarwani, Samraggi Choudhury, Sonu Gandhi, Shailesh Sharma

The paper analyzes SARS-CoV-2 transcriptome data to identify immunodominant epitopes for vaccine design through epitope prediction and molecular docking studies.

Genomics · Sep 10, 2020Peer-reviewedBioinformatics