Author

Koen K Van de Vijver

Ghent University HospitalORCID 0000-0002-2026-9790Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 2 Research Focus:cell type annotation· 2 Approach:experimental assay· 2 Organism:human· 2 Research Focus:spatial domain detection· 2 Research Focus:cell-cell communication· 1 Approach:deep learning· 1 Research Focus:differential expression· 1

Frequent Co-Authors

Aaron Verplancke· 1 shared Ada JunqueraiD· 1 shared Aleksandra ShabanovaiD· 1 shared Anna VähärautioiD· 1 shared Anni VirtaneniD· 1 shared Anniina FärkkiläiD· 1 shared Danique BerrevoetiD· 1 shared Dieter L. D. DeforceiD· 1 shared

Activity by Year

2026-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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1 shared paperGenomics

Aaron Verplancke

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2 papers

Recent·Most cited

GenomicsScientific ReportsPeer-reviewedSep 1, 2026

A laser capture microdissection-based method for high-sensitivity transcriptomics from archived FFPE tissue slides with single-cell resolution using LCM-FFPEseq

Elise Callens, Hannes Syryn, Koen Deserranno…·Filip Van Nieuwerburgh

LCM-FFPEseq enables high-sensitivity transcriptomics from FFPE tissues with single-cell resolution, detecting over 14,000 genes per sample using as few as 30 cells.

1 citation

humanbulk RNA-seq

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Cancer BiologyCancer DiscoveryPeer-reviewedFeb 9, 2026

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Single-cell spatial atlas of high-grade serous ovarian cancer unveils MHC class II as a key driver of spatial tumor ecosystems and clinical outcomes

Fernando Pérez‐Villatoro, Aleksandra Shabanova, Lilian van Wagensveld…·Anniina Färkkilä

Cyclic immunofluorescence of 265 high-grade serous ovarian carcinomas and random-forest feature ranking identify cancer-cell MHC-II as an adjusted predictor of longer survival marking immune-activated tumor-stroma hotspots.

10 citationstop 1%

humanimaging

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