Author

Iris Antes

Technical University of MunichORCID 0000-0002-2241-7187Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 2

Signature Assays, Organisms & Methods

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Assay:protein structure· 2 Approach:statistical model· 2 Research Focus:benchmarking· 1 Approach:experimental assay· 1 Organism:human· 1 Research Focus:protein structure prediction· 1

Frequent Co-Authors

Markus SchneideriD· 1 shared Martin ZachariasiD· 1 shared Okke MelseiD· 1 shared Ville R. I. KailaiD· 1 shared

Activity by Year

2022-2022 · peak 2/yr

Co-Author Collaboration Network

4 top collaborators · 3 mutual co-author links

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1 shared paperBioinformatics

Markus SchneiderORCID

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2 papers

Recent·Most cited

BioinformaticsJournal of Computational ChemistryPeer-reviewedDec 9, 2022

Assessment of Molecular Mechanics-based Zn2+ Models in Mono- and Bimetallic Ligand Binding Sites

Okke Melse, Iris Antes, Ville R. I. Kaila, Martin Zacharias

The paper evaluates Zn2+ models in metalloproteins, finding that nonbonded models struggle while dummy-atom models perform best for octahedral coordination.

21 citations

protein structurestatistical model

𝕏 PostBluesky

BioinformaticsPLoS ONEPeer-reviewedMar 17, 2022

SenseNet, a tool for analysis of protein structure networks obtained from molecular dynamics simulations

Markus Schneider, Iris Antes

SenseNet predicts allosteric residues in proteins using molecular dynamics simulations and mutual information, showing comparable accuracy to existing models without relying on NMR structures.

13 citations

humanprotein structure

𝕏 PostBluesky