Author

Pradeep Punnakkal

Post Graduate Institute of Medical Education and ResearchORCID 0000-0002-2295-3406Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Neuroscience· 1

Signature Assays, Organisms & Methods

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Research Focus:differential expression· 2 Research Focus:gene regulatory network inference· 2 Organism:human· 2 Approach:statistical model· 2 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Research Focus:database / resource· 1 Approach:experimental assay· 1

Frequent Co-Authors

Suneel KateriyaiD· 2 shared Gireesh AnirudhaniD· 1 shared Joydeep MahataiD· 1 shared Meghna Pacheriyil RajeshiD· 1 shared Shrabonti ChatterjeeiD· 1 shared Soura ChakrabortyiD· 1 shared Subhashree Mardi· 1 shared

Activity by Year

2023-2026 · peak 1/yr

Co-Author Collaboration Network

7 top collaborators · 16 mutual co-author links

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2 shared papersNeuroscience

Suneel KateriyaORCID

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2 papers

Recent·Most cited

Network Topology reveals disrupted AMPA receptor stabilization leads to an impaired LTD in epileptic synapses

Meghna Pacheriyil Rajesh, Suneel Kateriya, Pradeep Punnakkal

The paper identifies a core module of proteins involved in synaptic plasticity in epileptic synapses using network analysis and validates findings with patient transcriptomic data.

bioRxiv · Aug 19, 2026 · PreprintNeuroscience

COVID-19 ORF3a Viroporin Influenced Common and Unique Cellular Signalling Cascades in Lung, Heart and Brain Choroid Plexus Organoids with Additional Enriched MicroRNA Network Analyses for Lung and Brain Tissues

Soura Chakraborty, Shrabonti Chatterjee, Subhashree Mardi, Joydeep Mahata, Suneel Kateriya, Pradeep Punnakkal, Gireesh Anirudhan

The paper identifies tissue-specific host proteins and miRNA networks influenced by SARS-CoV-2 ORF3a in lung, heart, and brain, suggesting potential drug targets.

ACS Omega · Nov 17, 2023Peer-reviewedBioinformatics