Author

Vatsal Parikh

Duke UniversityORCID 0000-0002-2413-5423Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 1 Research Focus:differential expression· 1 Organism:human· 1 Approach:machine learning (classical)· 1 Approach:statistical model· 1 Organism:yeast· 1

Frequent Co-Authors

Ekansh MittaliD· 1 shared Raphael KirchgaessneriD· 1 shared

Activity by Year

2022-2022 · peak 2/yr

Co-Author Collaboration Network

2 top collaborators · 1 mutual co-author link

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1 shared paperBioinformatics

Ekansh MittalORCID

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2 papers

Recent·Most cited

Systems BiologybioRxivPreprintDec 20, 2022

MODELING POLARITY SITE MOVEMENT IN YEAST VIA CALCIUM-MEDIATED REGULATION OF GAP ACTIVITY

Vatsal Parikh

The paper models yeast polarity site movement by incorporating calcium-mediated GAP activity spikes into an existing positive feedback model, simulating oscillating and wandering polarity sites.

DOI 10.1101/2022.12.20.521256

yeaststatistical model

𝕏 PostBluesky

BioinformaticsbioRxivPreprintNov 20, 2022

Computational Pipeline to Identify Gene signatures that Define Cancer Subtypes

Ekansh Mittal, Vatsal Parikh, Raphael Kirchgaessner

The paper develops a computational strategy to identify gene signatures defining cancer subtypes using multi-omics data, achieving 92% model accuracy and identifying 20 significant genes in breast and glioma cancers.

DOI 10.1101/2022.11.20.517258

humanbulk RNA-seq

𝕏 PostBluesky