Author

Legana C H W Fingerhut

ARC Centre of Excellence for Coral Reef StudiesORCID 0000-0002-2482-5336Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 2

Signature Assays, Organisms & Methods

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Approach:machine learning (classical)· 2 Research Focus:benchmarking· 1 Assay:protein sequence· 1 Research Focus:variant calling· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Ira CookeiD· 2 shared David John MilleriD· 1 shared Dominik RafacziD· 1 shared Filip PietluchiD· 1 shared Jadwiga SłowikiD· 1 shared Jakub KałaiD· 1 shared Jan M. StrugnelliD· 1 shared Katarzyna SidorczukiD· 1 shared

Activity by Year

2020-2022 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 31 mutual co-author links

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2 shared papersBioinformatics

Ira CookeORCID

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2 papers

Recent·Most cited

BioinformaticsBriefings in BioinformaticsPeer-reviewedAug 21, 2022

Benchmarks in antimicrobial peptide prediction are biased due to the selection of negative data

Katarzyna Sidorczuk, Przemysław Gagat, Filip Pietluch…·Michał Jan Burdukiewicz

This study shows that AMP prediction benchmarks are biased due to negative data selection and introduces a web server for fair benchmarking.

98 citationstop 1%

protein sequencemachine learning (classical)

BioinformaticsBioinformaticsPeer-reviewedJul 14, 2020

ampir: an R package for fast genome-wide prediction of antimicrobial peptides

Legana C H W Fingerhut, David John Miller, Jan M. Strugnell…·Ira Cooke

The paper introduces ampir, an R package for fast genome-wide prediction of antimicrobial peptides, showing higher classification accuracy than existing methods.

75 citationstop 5%

whole-genome sequencingmachine learning (classical)