Author

Zhongneng Xu

Jinan UniversityORCID 0000-0002-2503-478XUnclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 2 Research Focus:differential expression· 2 Approach:statistical model· 2 Research Focus:gene regulatory network inference· 1 Organism:yeast· 1

Frequent Co-Authors

Shuichi AsakawaiD· 2 shared

Activity by Year

2021-2023 · peak 1/yr

2 papers

Recent·Most cited

BioinformaticsbioRxivPreprintMay 24, 2023

Estimating gross transcription rates from RNA level fluctuation data and the effects of sampling time intervals

Zhongneng Xu, Shuichi Asakawa

This study develops an algorithm to estimate gross transcription rates from RNA level fluctuation data and examines how sampling time intervals affect these estimates.

1 citation

yeastbulk RNA-seq

𝕏 PostBluesky

BioinformaticsPLoS Computational BiologyPeer-reviewedJul 23, 2021

A model explaining mRNA level fluctuations based on activity demands and RNA age

Zhongneng Xu, Shuichi Asakawa

The paper develops a model to explain mRNA level fluctuations by considering activity demands and RNA age, using single-cell time-series data to estimate transcription and degradation rates.

9 citations

bulk RNA-seqstatistical model

𝕏 PostBluesky