Author

Hikmet Budak

Montana State UniversityORCID 0000-0002-2556-2478Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Approach:statistical model· 3 Assay:whole-genome sequencing· 3 Research Focus:phylogenetics / evolution· 2 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1 Research Focus:genome assembly· 1 Research Focus:variant calling· 1 Assay:whole-exome sequencing· 1

Frequent Co-Authors

Anthony J W HalliD· 2 shared Babar HussainiD· 2 shared Qasim Saleem RazaiD· 2 shared Rana Muhammad AtifiD· 2 shared Sezgi BiyikliogluiD· 2 shared Zulfiqar AliiD· 2 shared A. V. VoylokoviD· 1 shared Alan Howard SchulmaniD· 1 shared

Activity by Year

2018-2023 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 17 mutual co-author links

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2 shared papersGenomics

Anthony J W HallORCID

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5 papers

Recent·Most cited

GenomicsbioRxivPreprintSep 22, 2023

Genome-wide characterization of MLO family in bread wheat shed light on its role in resistance to powdery mildew, biotic and abiotic stresses

Babar Hussain, Hamza Ramzan, Qasim Saleem Raza…·Zulfiqar Ali

This paper identifies 47 MLO genes in bread wheat, analyzes their phylogeny and expression, and shows their potential roles in resistance to powdery mildew and abiotic stresses.

DOI 10.1101/2023.09.22.559087

statistical modelgene regulatory network inference

𝕏 PostBluesky

GenomicsNature GeneticsPeer-reviewedMar 18, 2021

Chromosome-scale genome assembly provides insights into rye biology, evolution, and agronomic potential

M. Timothy Rabanus‐Wallace, Bernd Hackauf, Martin Mascher…·Nils Stein

The paper presents a chromosome-scale rye genome assembly to study genomic evolution and agronomic traits in Triticeae crops.

271 citationstop 1%

whole-genome sequencinggenome assembly

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GenomicsbioRxivPreprintOct 23, 2020

MADS-box genes galore in wheat genome: phylogenomics, evolution and stress associated functions

Qasim Saleem Raza, Awais Riaz, Rana Muhammad Atif…·Hikmet Budak

The paper identifies 300 MADS-box genes in wheat, classifies them into 16 subfamilies, and explores their evolutionary and stress-related functions.

5 citations

whole-genome sequencingstatistical model

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GenomicsGigaSciencePeer-reviewedJan 31, 2019

Integrating genomic resources to present full gene and promoter capture probe sets for bread wheat

Laura‐Jayne Gardiner, Thomas Brabbs, Alina R. Akhunova…·Anthony J W Hall

The paper presents and validates two capture probe sets for wheat to enable efficient and cost-effective re-sequencing of genes and promoters.

30 citations

whole-exome sequencingexperimental assay

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GenomicsGenome Biology and EvolutionPeer-reviewedOct 12, 2018

Genome sequence of the wheat stem sawfly, Cephus cinctus, a primitive hymenopteran and wheat pest, illuminates evolution of hymenopteran chemoreceptors

Hugh M. Robertson, Robert Michael Waterhouse, Kimberly K. O. Walden…·Hikmet Budak

The paper presents the genome of Cephus cinctus, a wheat pest, and analyzes its chemoreceptor evolution, identifying conserved and lineage-specific gene expansions.

32 citations

whole-genome sequencingstatistical model

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