Author

Julie Leloup

Centre National de la Recherche ScientifiqueORCID 0000-0002-2777-284XUnclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Microbiology· 3 Systems Biology· 1

Signature Assays, Organisms & Methods

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Assay:metagenomics· 3 Approach:statistical model· 3 Research Focus:ecology & biodiversity· 2 Research Focus:gene regulatory network inference· 2 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1

Frequent Co-Authors

Benjamin MarieiD· 3 shared Charlotte DuvaliD· 3 shared Sébastien HalaryiD· 3 shared Cécile BernardiD· 2 shared Dominique LamyiD· 2 shared Emilie Lance AiD· 2 shared Ludwig E. JardillieriD· 2 shared Marc TroussellieriD· 2 shared

Activity by Year

2025-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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3 shared papersMicrobiology

Benjamin MarieORCID

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4 papers

Recent·Most cited

MicrobiologyEnvironmental Microbiology ReportsPeer-reviewedApr 28, 2026

Higher trophic status leads to more diverse and divergent microeukaryote communities over time in urban lakes from the Greater Paris (France)

Sébastien Duperron, Pierre Foucault, Amaury Le Vern…·Julie Leloup

The paper examines how trophic status affects microeukaryote community dynamics in urban lakes over 18 months, finding that higher trophic status increases diversity and divergence.

2 citations

metagenomicsstatistical model

𝕏 PostBluesky

Systems BiologybioRxivPreprintMar 23, 2026

Integrating metagenome-scale metabolic modelling and metabolomics to identify biochemical interactions in Microcystis phycospheres

Juliette Audemard, Nicolas Creusot, Julie Leloup…·Clémence Frioux

The paper integrates metagenome-scale metabolic modeling and metabolomics to analyze Microcystis phycospheres, revealing metabolic interactions and functional differences among strains.

DOI 10.64898/2026.03.18.712574

metagenomicsmetabolomics

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MicrobiologyEnvironmental MicrobiomePeer-reviewedFeb 17, 2025

A summer in the Greater Paris: trophic status of peri-urban lakes shapes prokaryotic community structure and functional potential

Pierre Foucault, Sébastien Halary, Charlotte Duval…·Sébastien Duperron

This study examines how trophic status affects prokaryotic community structure and functional potential in nine peri-urban lakes around Paris over a summer season.

8 citations

metagenomicsstatistical model

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MicrobiologyPeer Community JournalPeer-reviewedFeb 6, 2025

Diel changes in the expression of a marker gene and candidate genes for intracellular amorphous CaCO3 biomineralization in Microcystis

Apolline Bruley, Juliette Gaëtan, Muriel F. Gugger…·Élodie Duprat

This study uses RNA-Seq to analyze the expression of the ccyA gene and related genes in Microcystis aeruginosa during a 24-hour cycle, identifying potential genes involved in intracellular amorphous calcium carbonate biomineralization.

7 citations

bulk RNA-seqexperimental assay

𝕏 PostBluesky