Author

Ashley M. Rooney

University Health NetworkORCID 0000-0002-2874-8120Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Research Focus:benchmarking· 1 Organism:E. coli· 1 Assay:metagenomics· 1 Approach:simulation· 1 Approach:statistical model· 1 Research Focus:variant calling· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Amogelang R. RaphenyaiD· 1 shared Andrew G. McArthuriD· 1 shared Bryan A. CoburniD· 1 shared Christine Seah· 1 shared Derek R. MacFaddeniD· 1 shared N. YeeiD· 1 shared Pierre H. H. SchneebergeriD· 1 shared Roberto Gustavo MelanoiD· 1 shared

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2021-2021 · peak 1/yr

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8 top collaborators · 28 mutual co-author links

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1 shared paperBioinformatics

Amogelang R. RaphenyaORCID

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1 paper

Recent·Most cited

BioinformaticsbioRxivPreprintJun 25, 2021

Performance characteristics of next-generation sequencing for antimicrobial resistance gene detection in genomes and metagenomes

Ashley M. Rooney, Amogelang R. Raphenya, Roberto Gustavo Melano…·Bryan A. Coburn

This study evaluates the performance of short-read sequencing for detecting antimicrobial resistance genes in genomes and metagenomes, finding that assembly-based methods require 15X coverage for reliable detection.

DOI 10.1101/2021.06.25.449921

E. coliwhole-genome sequencing

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