Author

Benjamin R. Babcock

Emory UniversityORCID 0000-0002-2902-8045Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Organism:human· 2 Assay:scRNA-seq· 2 Approach:statistical model· 2 Research Focus:batch correction / integration· 1 Research Focus:cell type annotation· 1 Research Focus:clustering· 1 Assay:proteomics· 1

Frequent Co-Authors

Astrid KostersiD· 2 shared Eliver GhosniD· 2 shared Junkai YangiD· 2 shared Congmin XuiD· 1 shared Mackenzie L White· 1 shared Peng QiuiD· 1 shared

Activity by Year

2021-2022 · peak 1/yr

Co-Author Collaboration Network

6 top collaborators · 13 mutual co-author links

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2 shared papersSystems Biology

Astrid KostersORCID

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2 papers

Recent·Most cited

Comprehensive multi-omics single-cell data integration reveals greater heterogeneity in the human immune system

Congmin Xu, Junkai Yang, Astrid Kosters, Benjamin R. Babcock, Peng Qiu, Eliver Ghosn

The paper introduces SuPERR-seq, a workflow for multi-omics single-cell data integration that improves cell-type classification and identifies novel immune cell subsets.

iScience · Sep 13, 2022Peer-reviewedSystems Biology

Data Matrix Normalization and Merging Strategies Minimize Batch-specific Systemic Variation in scRNA-Seq Data

Benjamin R. Babcock, Astrid Kosters, Junkai Yang, Mackenzie L White, Eliver Ghosn

The paper evaluates batch-effect correction methods in scRNA-seq by introducing a new metric and shows that optimized normalization and merging reduce the need for correction.

bioRxiv · Aug 18, 2021 · PreprintSystems Biology