Author

Iikki Donner

University of HelsinkiORCID 0000-0002-2957-8397Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Genetics· 1 Molecular Biology· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 3 Research Focus:gene regulatory network inference· 2 Organism:human· 2 Assay:bulk RNA-seq· 1 Research Focus:cell-cell communication· 1 Research Focus:database / resource· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1

Frequent Co-Authors

Craig Robert PrimmeriD· 2 shared Ehsan Pashay AhiiD· 2 shared Andrew Herbert HouseiD· 1 shared Annukka Ruokolainen· 1 shared Eevi KaasineniD· 1 shared Eirik R. ÅsheimiD· 1 shared Esa PitkäneniD· 1 shared Jaakko ErkinaroiD· 1 shared

Activity by Year

2017-2024 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 24 mutual co-author links

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2 shared papersGenetics

Craig Robert PrimmerORCID

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3 papers

Recent·Most cited

Sex-, development-, and nutrition-dependent expression of a major age-at-maturity gene in Atlantic salmon

Eirik R. Åsheim, Paul V. Debes, Andrew Herbert House, Petra Liljeström, Annukka Ruokolainen, Morgane Frapin, Iikki Donner, Ehsan Pashay Ahi, Jaakko Erkinaro, Jukka‐Pekka Verta, Craig Robert Primmer

This study examines how genetic variation in vgll3 affects maturation age in Atlantic salmon, showing sex- and context-dependent expression patterns and interactions with other genes.

bioRxiv · Sep 15, 2024 · PreprintGenetics

A pituitary gene network linking vgll3 to regulators of sexual maturation in male Atlantic salmon

Ehsan Pashay Ahi, Marion Sinclair‐Waters, Iikki Donner, Craig Robert Primmer

The paper identifies a gene regulatory network in Atlantic salmon linking vgll3 to regulators of sexual maturation, suggesting alternative mechanisms to GnRH1 in controlling c-jun and sf1 expression.

Comparative Biochemistry and Physiology Part A Molecular & Integrative Physiology · Oct 29, 2022Peer-reviewedMolecular Biology

BasePlayer: Versatile Analysis Software For Large-Scale Genomic Variant Discovery

Riku Katainen, Iikki Donner, Tatiana Cajuso, Eevi Kaasinen, Kimmo Palin, Veli Mäkinen, Lauri A. Aaltonen, Esa Pitkänen

BasePlayer is a software tool for analyzing large-scale NGS data, enabling variant analysis, visualization, and integration of genomic data.

bioRxiv · Apr 11, 2017 · PreprintBioinformatics