Author

Shanmugasundaram Venkataraman

Institute of Genetics and CancerORCID 0000-0002-3200-2698Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Developmental Biology· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 2 Organism:mouse· 2 Approach:statistical model· 2 Assay:bulk RNA-seq· 1 Assay:imaging· 1 Research Focus:spatial domain detection· 1

Frequent Co-Authors

Chris J ArmitiD· 2 shared Ann‐Marie MalloniD· 1 shared Bill HilliD· 1 shared Duncan R Davidson· 1 shared Henrik WesterbergiD· 1 shared James M. BrowniD· 1 shared Lydia TebouliD· 1 shared Matthijs C. van EedeiD· 1 shared

Activity by Year

2021-2022 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 31 mutual co-author links

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2 shared papersDevelopmental Biology

Chris J ArmitORCID

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2 papers

Recent·Most cited

Developmental BiologyDevelopmentPeer-reviewedJul 14, 2022

Integrated analysis of Wnt signalling system component gene expression

Paula Murphy, Chris J Armit, Bill Hill…·Duncan R Davidson

The paper maps Wnt and Fzd gene expression across mouse embryos in 3D space to identify novel co-expression territories and regions with unique or no expression.

14 citations

mousebulk RNA-seq

BioinformaticsDevelopmentPeer-reviewedFeb 11, 2021

LAMA: Automated image analysis for developmentalphenotyping of mouse embryos

Neil Horner, Shanmugasundaram Venkataraman, Chris J Armit…·Ann‐Marie Mallon

LAMA automates 3D image analysis for mouse embryo phenotyping, integrating with an anatomical atlas to annotate dysmorphologies.

20 citations

mouseimaging