Author

Lori G. Eckhardt

Auburn UniversityORCID 0000-0002-3270-8199Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 1 Organism:fungi (other)· 1 Approach:statistical model· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Gabriel Amorim de Albuquerque SilvaiD· 1 shared Janna R. WilloughbyiD· 1 shared Temitope Ruth FolorunsoiD· 1 shared

Activity by Year

2026-2026 · peak 1/yr

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3 top collaborators · 3 mutual co-author links

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1 shared paperGenomics

Gabriel Amorim de Albuquerque SilvaORCID

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1 paper

Recent·Most cited

GenomicsMicrobial GenomicsPeer-reviewedAug 26, 2026

Quantitative comparison of fungal genome assembly strategies using short and long-reads from simulated and empirical sequencing data

Gabriel Amorim de Albuquerque Silva, Temitope Ruth Folorunso, Lori G. Eckhardt, Janna R. Willoughby

This paper benchmarks fungal genome assembly strategies using simulated and empirical data, finding that moderate long-read coverage with short-read polishing provides optimal balance of contiguity, accuracy, and efficiency.

DOI 10.1099/mgen.0.001824

fungi (other)whole-genome sequencing

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