Author

Shaomin Ji

ORCID 0000-0002-3304-2114Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Approach:deep learning· 1 Research Focus:gene regulatory network inference· 1 Research Focus:protein design· 1 Assay:protein sequence· 1 Assay:protein structure· 1 Research Focus:protein structure prediction· 1 Approach:transformer / foundation model· 1

Frequent Co-Authors

Chaozhong LiuiD· 1 shared Dubeiqi Hong· 1 shared Guowei ZhouiD· 1 shared Hao WangiD· 1 shared J. X. ZhengiD· 1 shared Jianfeng Pan· 1 shared Linlin Chao· 1 shared Ming YangiD· 1 shared

Activity by Year

2025-2025 · peak 1/yr

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10 top collaborators · 45 mutual co-author links

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1 shared paperBioinformatics

Chaozhong LiuORCID

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1 paper

Recent·Most cited

Modality-chain reasoning enables multimodal protein modelling and design

Chaozhong Liu, Linlin Chao, Shaomin Ji, Hao Wang, Guowei Zhou, J. X. Zheng, Dubeiqi Hong, Yucheng Guo, Taorui Jiang, Zhangyang Gao, Ming Yang, Jianfeng Pan, Stan Ziqing Li, Xiaomin Zhang

This paper introduces modality-chain reasoning for multimodal protein modeling and design, showing improved performance in structure prediction, inverse folding, and fitness prediction compared to existing models.

bioRxiv · Jul 21, 2025 · PreprintBioinformatics