Author

Amitava Giri

Indian Institute of Technology BombayORCID 0000-0002-3654-5745Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Systems Biology· 3

Signature Assays, Organisms & Methods

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Approach:statistical model· 3 Assay:bulk RNA-seq· 1 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1 Organism:human· 1 Organism:mouse· 1 Assay:scRNA-seq· 1 Approach:simulation· 1

Frequent Co-Authors

Sandip KariD· 2 shared Gaohan YuiD· 1 shared Guang YaoiD· 1 shared Jianhua XingiD· 1 shared Jingyu ZhangiD· 1 shared Ke NiiD· 1 shared Sophia HuiD· 1 shared Yan ZhangiD· 1 shared

Activity by Year

2021-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 36 mutual co-author links

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2 shared papersSystems Biology

Sandip KarORCID

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3 papers

Recent·Most cited

Epithelial-mesenchymal transition couples with cell cycle arrest at various stages

Sophia Hu, Yong Lu, Gaohan Yu, Zhiqian Zheng, Ke Ni, Amitava Giri, Jingyu Zhang, Yan Zhang, Guang Yao, Jianhua Xing

The paper shows that EMT paths are influenced by cell cycle phase coupling and highlights the limitations of low-dimensional representations in capturing transition dynamics.

Communications Biology · Jan 29, 2026Peer-reviewedSystems Biology

Interlinked Bi-stable Switches Govern the Cell Fate Commitment of Embryonic Stem Cells

Amitava Giri, Sandip Kar

This paper proposes a model of interlinked bistable switches governing Oct4 and Nanog dynamics in embryonic stem cells, explaining their expression patterns during differentiation.

FEBS Letters · Feb 26, 2024Peer-reviewedSystems Biology

Incoherent modulation of bi-stable dynamics orchestrates the Mushroom and Isola bifurcations

Amitava Giri, Sandip Kar

The paper shows that four minimal network motifs, combining positive and incoherent feedback, can generate Mushroom and Isola bifurcations in biological networks.

Journal of Theoretical Biology · Aug 26, 2021Peer-reviewedSystems Biology