Author

Gaohan Yu

University of PittsburghORCID 0009-0007-4849-9735Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:trajectory inference· 2 Research Focus:benchmarking· 1 Research Focus:cell type annotation· 1 Approach:deep learning· 1 Organism:human· 1 Assay:imaging· 1 Assay:scRNA-seq· 1 Approach:simulation· 1

Frequent Co-Authors

Jianhua XingiD· 2 shared Ke NiiD· 2 shared Sophia HuiD· 2 shared Amitava GiriiD· 1 shared Dante PoeiD· 1 shared Guang YaoiD· 1 shared Jingyu ZhangiD· 1 shared Mia Sanborn· 1 shared

Activity by Year

2025-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 33 mutual co-author links

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2 shared papersSystems Biology

Jianhua XingORCID

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2 papers

Recent·Most cited

Systems BiologyCommunications BiologyPeer-reviewedJan 29, 2026

Epithelial-mesenchymal transition couples with cell cycle arrest at various stages

Sophia Hu, Yong Lu, Gaohan Yu…·Jianhua Xing

The paper shows that EMT paths are influenced by cell cycle phase coupling and highlights the limitations of low-dimensional representations in capturing transition dynamics.

6 citationstop 3%

humanscRNA-seq

𝕏 PostBluesky

BioinformaticsbioRxivPreprintFeb 23, 2025

LivecellX: Corrective Deep Learning for Object-Oriented Single-Cell Analysis in Live-Cell Imaging

Ke Ni, Gaohan Yu, Zhiqian Zheng…·Jianhua Xing

LivecellX corrects segmentation and tracking errors in live-cell imaging using deep learning and provides tools for lineage reconstruction and dynamic analysis.

DOI 10.1101/2025.02.23.639532

imagingdeep learning

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