Juan Xu

SMTdb provides a spatial meta-transcriptome resource for cancer microbiomes, enabling exploration of microbial abundance, distribution, and interactions with host cells.

LncCE identifies and characterizes cellular-elevated lncRNAs across normal and cancer tissues using single-cell RNA sequencing data, providing expression patterns and clinical associations.

Cancer Stemness Online provides a resource for scoring cancer stemness and analyzing its associations with immune response and cancer hallmarks.

ILnc is a method using lncRNA signatures to estimate immune cell infiltration in tumors, showing higher accuracy than protein-coding gene signatures and revealing associations with clinical outcomes.

This study identifies novel epigenetically dysregulated non-coding RNAs in breast cancer through genome-wide DNA methylome analysis, revealing their association with transcriptional changes and disease phenotypes.