Author

Ricarda Maria Schmithausen

University Hospital BonnORCID 0000-0002-3736-8672Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Microbiology· 1 Molecular Biology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 2 Research Focus:database / resource· 1 Research Focus:host-pathogen & immune response· 1 Organism:human· 1 Assay:metagenomics· 1 Approach:statistical model· 1

Frequent Co-Authors

Adrian DörriD· 1 shared Amir Ben-Shmuel· 1 shared Ann-Kathrin DörriD· 1 shared Aviv RegeviD· 1 shared Bärbel Lippke· 1 shared Brian ClearyiD· 1 shared C. Rösing· 1 shared D. Exner· 1 shared

Activity by Year

2018-2024 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 17 mutual co-author links

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1 shared paperBioinformatics

Adrian DörrORCID

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Author profile →

3 papers

Recent·Most cited

RiboSnake - a user-friendly, robust, reproducible, multipurpose and documentation-extensive pipeline for 16S rRNA gene microbiome analysis

Ann-Kathrin Dörr, Josefa Welling, Adrian Dörr, Jule Gosch, Hannah Möhlen, Ricarda Maria Schmithausen, Jan Kehrmann, Folker Meyer, Ivana Kraiselburd

RiboSnake provides a validated, automated, and customizable pipeline for 16S rRNA gene microbiome analysis using QIIME2 and Snakemake.

Gigabyte · Aug 31, 2024Peer-reviewedBioinformatics

LAMP-Seq: Population-Scale COVID-19 Diagnostics Using Combinatorial Barcoding

Jonathan Leo Schmid-Burgk, Ricarda Maria Schmithausen, David Li, Ronja Hollstein, Amir Ben-Shmuel, Ofir Israeli, Shay Weiss, Nir Paran, Gero Wilbring, Jana Liebing, David Feldman, Mikolaj Michal Slabicki, Bärbel Lippke, Esther Sib, Jacob de Riba Borrajo, , Feng Zhang

LAMP-Seq combines three-step isothermal RT-LAMP amplification with combinatorial barcoding to pool and sequence SARS-CoV-2 clinical samples en masse for scalable diagnostics.

bioRxiv · Apr 6, 2020 · PreprintMolecular Biology

The washing machine as a reservoir for transmission of ESBL-producing Klebsiella oxytoca in newborns

R.M. Schmithausen, M. Exner, C. Rösing, M. Savin, S. Hack, S.F. Bloomfield, M. Kaase, J. Gebel, S. Engelhart, D. Exner

This paper identifies a washing machine as a reservoir for transmitting ESBL-producing Klebsiella oxytoca among newborns in a hospital.

bioRxiv · Jun 23, 2018 · PreprintMicrobiology