Author

Carlos Victor de Lannoy

Wageningen University & ResearchORCID 0000-0002-3754-0508Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 3 Genetics· 1

Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 3 Assay:long-read sequencing· 2 Approach:benchmark study· 1 Approach:deep learning· 1 Approach:experimental assay· 1 Organism:human· 1 Research Focus:protein design· 1 Research Focus:protein structure prediction· 1

Frequent Co-Authors

Dick de RidderiD· 4 shared Judith E. RisseiD· 2 shared Ben NoordijkiD· 1 shared Florian Leonardus Rudolfus LucasiD· 1 shared Giovanni MagliaiD· 1 shared Jos M. RaaijmakersiD· 1 shared Reindert NijlandiD· 1 shared Víctor J. CarrióniD· 1 shared

Activity by Year

2017-2023 · peak 1/yr

Co-Author Collaboration Network

8 top collaborators · 14 mutual co-author links

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4 shared papersBioinformatics

Dick de RidderORCID

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Author profile →

4 papers

Recent·Most cited

baseLess: Lightweight detection of sequences in raw MinION data

Ben Noordijk, Reindert Nijland, Víctor J. Carrión, Jos M. Raaijmakers, Dick de Ridder, Carlos Victor de Lannoy

baseLess detects target sequences in raw MinION data using small neural networks, achieving accurate classification on low-cost hardware.

Bioinformatics Advances · Jan 1, 2023Peer-reviewedBioinformatics

Chop-n-drop: in silico assessment of a novel single-molecule protein fingerprinting method employing fragmentation and nanopore detection

Carlos Victor de Lannoy, Florian Leonardus Rudolfus Lucas, Giovanni Maglia, Dick de Ridder

The paper evaluates a nanopore-based method for single-molecule protein identification, showing high accuracy and robustness in simulated conditions.

iScience · Oct 1, 2021Peer-reviewedBioinformatics

poreTally: run and publish de novo Nanopore assembler benchmarks

Carlos Victor de Lannoy, Judith E. Risse, Dick de Ridder

poreTally benchmarks de novo Nanopore assembly tools by automatically assembling, analyzing, and reporting results for sharing and collective benchmarking.

Bioinformatics · Dec 21, 2018Peer-reviewedBioinformatics

A Sequencer Coming Of Age: De Novo Genome Assembly Using MinION Reads

Carlos Victor de Lannoy, Dick de Ridder, Judith E. Risse

This paper reviews the MinION's utility for de novo genome assembly, highlighting its potential for portable and affordable sequencing despite current errors, and calls for benchmarking due to rapid development.

F1000Research · Dec 12, 2017Peer-reviewedGenetics