Author

Hiroshi Yamashita

Japan Fisheries Research and Education AgencyORCID 0000-0002-3909-5073Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Zoology· 2 Genomics· 1

Signature Assays, Organisms & Methods

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Research Focus:gene regulatory network inference· 3 Assay:whole-genome sequencing· 3 Organism:non-human primate· 2 Assay:bulk RNA-seq· 1 Research Focus:chromatin & epigenetic regulation· 1 Approach:comparative / phylogenetic analysis· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1

Frequent Co-Authors

Eiichi ShoguchiiD· 3 shared Chuya ShinzatoiD· 2 shared Go Shimada· 2 shared Mayumi KawamitsuiD· 2 shared Taiga UchidaiD· 2 shared James Davis ReimeriD· 1 shared Yi‐Ling Chiu· 1 shared Yuki YoshiokaiD· 1 shared

Activity by Year

2026-2026 · peak 3/yr

Co-Author Collaboration Network

8 top collaborators · 19 mutual co-author links

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3 shared papersZoology

Eiichi ShoguchiORCID

Mutual co-authors in cluster

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3 papers

Recent·Most cited

Genomic insights into photosymbiosis in giant clams: Comparisons with coral strategies

Taiga Uchida, Hiroshi Yamashita, Go Shimada, Mayumi Kawamitsu, Eiichi Shoguchi, Chuya Shinzato

This study compares the molecular mechanisms of photosymbiosis in giant clams with corals, identifying conserved and divergent strategies in nutrient exchange.

Current Biology · Apr 24, 2026Peer-reviewedZoology

Comparative genomics of zooxanthellate and azooxanthellate Palythoa (Cnidaria: Zoantharia) provides insights into symbiosis evolution and the origin of palytoxin

Yuki Yoshioka, Eiichi Shoguchi, Yi‐Ling Chiu, Mayumi Kawamitsu, James Davis Reimer, Hiroshi Yamashita

This study compares genomes of symbiotic and non-symbiotic Palythoa species to investigate symbiosis evolution and palytoxin origin, finding that palytoxin likely originates from associated bacteria.

bioRxiv · Apr 10, 2026 · PreprintGenomics

Possible Novel Sulfolipid Utilization Pathway in Giant Clams and Other Aquatic Invertebrates: Implications for Photosymbiosis and Sulfur Cycling

Taiga Uchida, Hiroshi Yamashita, Go Shimada, Eiichi Shoguchi, Chuya Shinzato

bioRxiv · Feb 14, 2026 · PreprintZoology