Gihanna Galindez

TRIPS identifies disease-associated transcription factors by integrating differential expression and network perturbation analysis in case-control data.

This paper introduces nucleotide dependency analysis to identify genomic functional elements, showing it outperforms existing methods in detecting regulatory elements and RNA structures.

BoostDiff identifies differential gene regulatory networks between disease and healthy states, outperforming existing methods on simulated and real transcriptomics data.

This study identifies genes and markers associated with growth variation in juvenile sandfish using transcriptome analysis of fast- and slow-growing individuals.