Mira Ayadi

This paper benchmarks deconvolution algorithms for multi-omic data, identifying their strengths and limitations across different conditions and data types.

DECONbench benchmarks deconvolution methods for quantifying tumor cell-type heterogeneity by providing datasets, tools, and performance evaluation.

The paper introduces mMCP-counter, a method to quantify immune and stromal cell populations in murine samples using gene expression, showing it outperforms existing methods and predicts treatment response.